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Constructing Efficient MCMC Methods Using Temporary Mapping and Caching


Monday, February 12th 2007 -- Radford Neal


Abstract:
 

I describe two general methods for obtaining efficient Markov chain Monte Carlo methods - temporarily mapping to a new space, which may be larger or smaller than the original, and caching the results of previous computations for re-use. These methods can be combined to improve efficiency for problems where probabilities can be quickly recomputed when only a subset of `fast' variables have changed. In combination, these methods also allow one to effectively adapt tuning parameters, such as the stepsize of random-walk Metropolis updates, without actually changing the Markov chain transitions used, thereby avoiding the issue that changing the transitions could undermine convergence to the desired distribution. Temporary mapping and caching can be applied in many other ways as well, offering a wide scope for development of useful new MCMC methods.